Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810523.1_cds_XP_016496235.1_10477
CDS Infomation

[gene=LOC107815215] [db_xref=GeneID:107815215] [protein=pentatricopeptide repeat-containing protein At5g47360-like] [protein_id=XP_016496235.1] [location=3013..4458] [gbkey=CDS]
Sequence

ATGCTTCCTCCATCAATTTCTCGCCTTTTCTTGACCACTAAGCCAGCCGATAAGCCAAAA
TTTGTACTCGAGAAGGTCCATTTTTTTACCACTTGTTCATCATCAGCTGGAGAATTCTTG
AGTCATTTGCTGGAAAGTAAAAAGGGGTCTGGTCTGGAGAAGTCTCTGAACACGGTTAAG
ACTAAACTAGATGCTAAATGTGTTAATGAAGTATTAGAGAAATGCGCCATTGATGATCCT
CATATGGGTCTCAGATTCTTCATTTGGTCTGGACTTCATCCCAGCTATAGACACAGCAGT
TACATGTTCAGTAGAGCTTATAAATTGCTTGGATTTGATCGCGAACCACAAATTATTGAA
GATTTCATTGAGGCTTATAGGCTGCAGAATAAATATGTTCCAAGTGCTAAGATGTTTAAG
GTTATATTGAATTTGTGTAGAGTGGGAAAAGATGCTACCTTGGGCTTGTGGGTATTGAGG
AAAATGAAAGAGTCCAACTGTCGGCCAGACACGACAGTGTATAATGTAGTTATTCGATTA
TTGTGCGAGAAGGGTGATATTAATGAGGCTCTGTTTTTTATGAGAGAGATGGATTCGAGT
GATCTTCATCCTGATATGATCACATATGTTGTGATGATTAAGGGGTTGTCTGAGGTGGGT
CGGTTGGAAGAAGCTTGTGGATTAACCAAAGCTATGAGGGGACATGGATGTGTGCCAAAT
ACGGTGACCTATTCAGCTCTTCTTGATGGGATTTGTAGGTTCGGGAGTTTGGAAAGGGCG
CTTGAGTTATTGAGAGAAATGGAAAAAGATGGTGGGCAGTGTAAGCCAAACGTCGTTACT
TATACTACTGTGGTTCAGAATTTTGTTGAGAAAGGTCAGTCGATAGAGGCATTAAGTATT
TTGGACCAAATGAGGGATTTTGGTTGTAAACCAAATAGAGTACTTATCTGTACTTTGATT
CAGGGTCTTTGCAAAGATGGGCATATGGAGGAAGCTCATCAAGTCATCAACAGAGTAGCT
GAATGTGGTATTCCATATGATTCTTGTTACAGTTTTCTAGTTTTATCACTGTTTCGGATT
GGAAAACTCAAGGAGGCAGAAATGTGTTTTAGGAGAATGTTGGCTGGTGGCCTAAAGCCT
GATGGTTTGACCTCAAGCACAATAATGAGATGGCTTTGTCAGCAGAGAAGGATACTTGAT
GGATATCACTTGATTGACGCGATTGAGCAGTCTGCAGGCGTATCTTCTATAGATTCTGAT
ATTTATTGTATACTTATGGCTGGACTATGTGAGGAAAATCATCTTGTTGAAGCTGCAAAG
CTTGCTAGTCTAATGGTAGGGAAAGGAATTCAGCTTAAAGGTCCTTGTACTAAGAATGTA
ATTGAATGTCTAGGACGTTGTGGCAAAGAAGATTTAGCTTCAAGCATTGGTAGTATTAAG
TGCTGA

Peptide Sequence

PEP ID

XP_016496235.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g47360-like [Nicotiana tabacum]
Sequence

MLPPSISRLFLTTKPADKPKFVLEKVHFFTTCSSSAGEFLSHLLESKKGSGLEKSLNTVK
TKLDAKCVNEVLEKCAIDDPHMGLRFFIWSGLHPSYRHSSYMFSRAYKLLGFDREPQIIE
DFIEAYRLQNKYVPSAKMFKVILNLCRVGKDATLGLWVLRKMKESNCRPDTTVYNVVIRL
LCEKGDINEALFFMREMDSSDLHPDMITYVVMIKGLSEVGRLEEACGLTKAMRGHGCVPN
TVTYSALLDGICRFGSLERALELLREMEKDGGQCKPNVVTYTTVVQNFVEKGQSIEALSI
LDQMRDFGCKPNRVLICTLIQGLCKDGHMEEAHQVINRVAECGIPYDSCYSFLVLSLFRI
GKLKEAEMCFRRMLAGGLKPDGLTSSTIMRWLCQQRRILDGYHLIDAIEQSAGVSSIDSD
IYCILMAGLCEENHLVEAAKLASLMVGKGIQLKGPCTKNVIECLGRCGKEDLASSIGSIK
C

Transcript Sequence

Gene sequence data has not been registered.